Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Ntrk2-205ENSMUST00000224402 2284 ntBASIC17.04■□□□□ 0.32
CiitaP79621 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CiitaP79621 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CiitaP79621 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.03■□□□□ 0.32
CiitaP79621 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.03■□□□□ 0.32
CiitaP79621 AC147366.1-201ENSMUST00000227671 852 ntBASIC17.03■□□□□ 0.32
CiitaP79621 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.03■□□□□ 0.32
CiitaP79621 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CiitaP79621 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC17.03■□□□□ 0.32
CiitaP79621 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CiitaP79621 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Gm11185-201ENSMUST00000117732 1007 ntBASIC17.02■□□□□ 0.32
CiitaP79621 Gm11779-201ENSMUST00000118541 368 ntBASIC17.02■□□□□ 0.32
CiitaP79621 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC17.02■□□□□ 0.32
CiitaP79621 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CiitaP79621 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CiitaP79621 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CiitaP79621 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.01■□□□□ 0.31
CiitaP79621 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.01■□□□□ 0.31
CiitaP79621 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.01■□□□□ 0.31
CiitaP79621 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.01■□□□□ 0.31
CiitaP79621 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 AC122024.2-201ENSMUST00000220086 871 ntBASIC17.01■□□□□ 0.31
CiitaP79621 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CiitaP79621 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CiitaP79621 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
CiitaP79621 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17■□□□□ 0.31
CiitaP79621 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC17■□□□□ 0.31
CiitaP79621 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC17■□□□□ 0.31
CiitaP79621 Gm42670-201ENSMUST00000201816 1292 ntBASIC17■□□□□ 0.31
CiitaP79621 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17■□□□□ 0.31
CiitaP79621 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CiitaP79621 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
CiitaP79621 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17■□□□□ 0.31
CiitaP79621 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms