Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.7■□□□□ 0.1
Ldb1P70662 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC15.7■□□□□ 0.1
Ldb1P70662 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.7■□□□□ 0.1
Ldb1P70662 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ldb1P70662 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ldb1P70662 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
Ldb1P70662 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Ldb1P70662 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ldb1P70662 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Ldb1P70662 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ldb1P70662 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 CT010478.1-201ENSMUST00000220747 2787 ntBASIC15.69■□□□□ 0.1
Ldb1P70662 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.69■□□□□ 0.1
Ldb1P70662 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ldb1P70662 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ldb1P70662 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ldb1P70662 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ldb1P70662 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Rprl3-201ENSMUST00000157400 290 ntBASIC15.68■□□□□ 0.1
Ldb1P70662 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Gm27867-201ENSMUST00000184778 125 ntBASIC15.68■□□□□ 0.1
Ldb1P70662 Gm44454-201ENSMUST00000198541 138 ntBASIC15.68■□□□□ 0.1
Ldb1P70662 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC15.68■□□□□ 0.1
Ldb1P70662 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.68■□□□□ 0.1
Ldb1P70662 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ldb1P70662 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ldb1P70662 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Ldb1P70662 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ldb1P70662 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ldb1P70662 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Ldb1P70662 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.67■□□□□ 0.1
Ldb1P70662 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Gm7367-201ENSMUST00000057611 492 ntBASIC15.67■□□□□ 0.1
Ldb1P70662 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ldb1P70662 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ldb1P70662 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ldb1P70662 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ldb1P70662 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Ldb1P70662 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms