Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Gabra1P62812 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.3□□□□□ -0.28
Gabra1P62812 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Gabra1P62812 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gabra1P62812 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Gabra1P62812 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Gm12134-201ENSMUST00000122109 520 ntBASIC13.29□□□□□ -0.28
Gabra1P62812 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC13.29□□□□□ -0.28
Gabra1P62812 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Gabra1P62812 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.29□□□□□ -0.28
Gabra1P62812 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC13.29□□□□□ -0.28
Gabra1P62812 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.29□□□□□ -0.28
Gabra1P62812 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Gabra1P62812 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.29□□□□□ -0.28
Gabra1P62812 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Gabra1P62812 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Gabra1P62812 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Gm27275-201ENSMUST00000184318 272 ntBASIC13.28□□□□□ -0.28
Gabra1P62812 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Gabra1P62812 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Gabra1P62812 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Gabra1P62812 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.27□□□□□ -0.28
Gabra1P62812 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Gabra1P62812 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Gabra1P62812 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC13.27□□□□□ -0.28
Gabra1P62812 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Gabra1P62812 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabra1P62812 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabra1P62812 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Gabra1P62812 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.27□□□□□ -0.29
Gabra1P62812 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC13.27□□□□□ -0.29
Gabra1P62812 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC13.27□□□□□ -0.29
Gabra1P62812 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Gabra1P62812 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.27□□□□□ -0.29
Gabra1P62812 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms