Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.43□□□□□ -0.1
Lsm3P62311 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.43□□□□□ -0.1
Lsm3P62311 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.43□□□□□ -0.1
Lsm3P62311 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Lsm3P62311 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.42□□□□□ -0.1
Lsm3P62311 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lsm3P62311 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Lsm3P62311 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC14.42□□□□□ -0.1
Lsm3P62311 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm3P62311 AV356131-201ENSMUST00000206201 750 ntBASIC14.42□□□□□ -0.1
Lsm3P62311 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.42□□□□□ -0.1
Lsm3P62311 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Lsm3P62311 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Lsm3P62311 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC14.41□□□□□ -0.1
Lsm3P62311 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.41□□□□□ -0.1
Lsm3P62311 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Lsm3P62311 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Lsm3P62311 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.41□□□□□ -0.1
Lsm3P62311 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Lsm3P62311 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.4□□□□□ -0.1
Lsm3P62311 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lsm3P62311 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.4□□□□□ -0.1
Lsm3P62311 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Lsm3P62311 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Gm12382-201ENSMUST00000122005 922 ntBASIC14.4□□□□□ -0.1
Lsm3P62311 Gm18958-201ENSMUST00000174258 762 ntBASIC14.4□□□□□ -0.1
Lsm3P62311 Gm42642-201ENSMUST00000200683 355 ntBASIC14.4□□□□□ -0.1
Lsm3P62311 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.4□□□□□ -0.1
Lsm3P62311 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Lsm3P62311 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Lsm3P62311 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Lsm3P62311 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms