Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Lrch1P62046 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Lrch1P62046 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Lrch1P62046 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Lrch1P62046 Gm15693-201ENSMUST00000120470 637 ntBASIC18.5■□□□□ 0.55
Lrch1P62046 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Gm5779-201ENSMUST00000218467 910 ntBASIC18.5■□□□□ 0.55
Lrch1P62046 CT025555.1-201ENSMUST00000225901 1217 ntBASIC18.5■□□□□ 0.55
Lrch1P62046 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.5■□□□□ 0.55
Lrch1P62046 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Lrch1P62046 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC18.49■□□□□ 0.55
Lrch1P62046 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Lrch1P62046 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC18.49■□□□□ 0.55
Lrch1P62046 Gm11453-201ENSMUST00000117318 1007 ntBASIC18.49■□□□□ 0.55
Lrch1P62046 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18.49■□□□□ 0.55
Lrch1P62046 Gm13823-201ENSMUST00000119930 345 ntBASIC18.49■□□□□ 0.55
Lrch1P62046 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lrch1P62046 Gm9954-202ENSMUST00000198686 4725 ntBASIC18.49■□□□□ 0.55
Lrch1P62046 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Lrch1P62046 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lrch1P62046 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.49■□□□□ 0.55
Lrch1P62046 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Gm12017-201ENSMUST00000122453 1003 ntBASIC18.48■□□□□ 0.55
Lrch1P62046 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.48■□□□□ 0.55
Lrch1P62046 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC18.48■□□□□ 0.55
Lrch1P62046 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
Lrch1P62046 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lrch1P62046 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lrch1P62046 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Lrch1P62046 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Gm37277-201ENSMUST00000194052 1111 ntBASIC18.47■□□□□ 0.55
Lrch1P62046 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lrch1P62046 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lrch1P62046 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.46■□□□□ 0.55
Lrch1P62046 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC18.46■□□□□ 0.55
Lrch1P62046 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.46■□□□□ 0.55
Lrch1P62046 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Lrch1P62046 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lrch1P62046 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC18.46■□□□□ 0.55
Lrch1P62046 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lrch1P62046 Gm27618-201ENSMUST00000183671 60 ntBASIC18.46■□□□□ 0.55
Lrch1P62046 Gm2272-201ENSMUST00000194903 582 ntBASIC18.46■□□□□ 0.55
Lrch1P62046 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lrch1P62046 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lrch1P62046 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lrch1P62046 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lrch1P62046 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrch1P62046 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrch1P62046 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrch1P62046 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrch1P62046 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
Lrch1P62046 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lrch1P62046 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms