Protein–RNA interactions for Protein: P56477

Irf5, Interferon regulatory factor 5, mousemouse

Predictions only

Length 497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf5P56477 Gm24513-201ENSMUST00000174964 138 ntBASIC18.62■□□□□ 0.57
Irf5P56477 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC18.62■□□□□ 0.57
Irf5P56477 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.62■□□□□ 0.57
Irf5P56477 Gm15590-201ENSMUST00000078419 552 ntBASIC18.62■□□□□ 0.57
Irf5P56477 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Irf5P56477 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Irf5P56477 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Irf5P56477 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Irf5P56477 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Irf5P56477 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Gm14140-201ENSMUST00000119999 995 ntBASIC18.61■□□□□ 0.57
Irf5P56477 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Gm27397-201ENSMUST00000184997 107 ntBASIC18.61■□□□□ 0.57
Irf5P56477 Gm43935-201ENSMUST00000203569 1050 ntBASIC18.61■□□□□ 0.57
Irf5P56477 AV026068-213ENSMUST00000223675 1171 ntBASIC18.61■□□□□ 0.57
Irf5P56477 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.61■□□□□ 0.57
Irf5P56477 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Irf5P56477 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Irf5P56477 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.6■□□□□ 0.57
Irf5P56477 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Irf5P56477 Gm15173-201ENSMUST00000122049 433 ntBASIC18.6■□□□□ 0.57
Irf5P56477 Gm12953-201ENSMUST00000138426 751 ntTSL 2 BASIC18.6■□□□□ 0.57
Irf5P56477 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Gm25406-201ENSMUST00000157599 105 ntBASIC18.6■□□□□ 0.57
Irf5P56477 Gm7063-201ENSMUST00000186840 981 ntBASIC18.6■□□□□ 0.57
Irf5P56477 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC18.6■□□□□ 0.57
Irf5P56477 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Irf5P56477 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.6■□□□□ 0.57
Irf5P56477 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Irf5P56477 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Irf5P56477 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Gm4995-201ENSMUST00000117247 432 ntBASIC18.59■□□□□ 0.57
Irf5P56477 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.59■□□□□ 0.57
Irf5P56477 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC18.59■□□□□ 0.57
Irf5P56477 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Gm9727-201ENSMUST00000161387 555 ntBASIC18.59■□□□□ 0.57
Irf5P56477 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.59■□□□□ 0.57
Irf5P56477 Gm8655-201ENSMUST00000221159 852 ntBASIC18.59■□□□□ 0.57
Irf5P56477 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Irf5P56477 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.59■□□□□ 0.57
Irf5P56477 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Irf5P56477 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC18.59■□□□□ 0.57
Irf5P56477 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Irf5P56477 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Irf5P56477 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
Irf5P56477 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Irf5P56477 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.58■□□□□ 0.56
Irf5P56477 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC18.58■□□□□ 0.56
Irf5P56477 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Irf5P56477 AC225888.1-201ENSMUST00000227184 728 ntBASIC18.58■□□□□ 0.56
Irf5P56477 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms