Protein–RNA interactions for Protein: P56390

Cks2, Cyclin-dependent kinases regulatory subunit 2, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks2P56390 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.17□□□□□ -0.3
Cks2P56390 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Cks2P56390 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cks2P56390 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC13.17□□□□□ -0.3
Cks2P56390 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Cks2P56390 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Cks2P56390 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Cks2P56390 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.16□□□□□ -0.3
Cks2P56390 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.16□□□□□ -0.3
Cks2P56390 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC13.16□□□□□ -0.3
Cks2P56390 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC13.16□□□□□ -0.3
Cks2P56390 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cks2P56390 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Cks2P56390 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cks2P56390 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.15□□□□□ -0.3
Cks2P56390 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Cks2P56390 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.15□□□□□ -0.3
Cks2P56390 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.15□□□□□ -0.3
Cks2P56390 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.15□□□□□ -0.3
Cks2P56390 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC13.15□□□□□ -0.3
Cks2P56390 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.15□□□□□ -0.3
Cks2P56390 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cks2P56390 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cks2P56390 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cks2P56390 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cks2P56390 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cks2P56390 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms