Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Abcd3P55096 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Abcd3P55096 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Abcd3P55096 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Abcd3P55096 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd3P55096 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.08□□□□□ -0.15
Abcd3P55096 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd3P55096 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Abcd3P55096 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.08□□□□□ -0.16
Abcd3P55096 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC14.08□□□□□ -0.16
Abcd3P55096 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.08□□□□□ -0.16
Abcd3P55096 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Abcd3P55096 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
Abcd3P55096 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Abcd3P55096 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Abcd3P55096 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Asic1-205ENSMUST00000228185 1818 ntBASIC14.07□□□□□ -0.16
Abcd3P55096 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
Abcd3P55096 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.07□□□□□ -0.16
Abcd3P55096 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.07□□□□□ -0.16
Abcd3P55096 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.07□□□□□ -0.16
Abcd3P55096 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Abcd3P55096 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.07□□□□□ -0.16
Abcd3P55096 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Abcd3P55096 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Abcd3P55096 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.06□□□□□ -0.16
Abcd3P55096 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Abcd3P55096 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Abcd3P55096 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC14.06□□□□□ -0.16
Abcd3P55096 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms