Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NrlP54846 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NrlP54846 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NrlP54846 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
NrlP54846 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NrlP54846 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.74■□□□□ 0.27
NrlP54846 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Bloc1s5-203ENSMUST00000224902 612 ntBASIC16.74■□□□□ 0.27
NrlP54846 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
NrlP54846 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NrlP54846 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.73■□□□□ 0.27
NrlP54846 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Gm4913-201ENSMUST00000117075 1290 ntBASIC16.73■□□□□ 0.27
NrlP54846 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC16.73■□□□□ 0.27
NrlP54846 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.73■□□□□ 0.27
NrlP54846 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC16.73■□□□□ 0.27
NrlP54846 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NrlP54846 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.73■□□□□ 0.27
NrlP54846 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NrlP54846 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NrlP54846 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.72■□□□□ 0.27
NrlP54846 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NrlP54846 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.72■□□□□ 0.27
NrlP54846 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.72■□□□□ 0.27
NrlP54846 AC117588.1-201ENSMUST00000228510 999 ntBASIC16.72■□□□□ 0.27
NrlP54846 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NrlP54846 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
NrlP54846 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NrlP54846 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NrlP54846 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.71■□□□□ 0.27
NrlP54846 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.71■□□□□ 0.27
NrlP54846 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.71■□□□□ 0.27
NrlP54846 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 AC131709.1-201ENSMUST00000224731 1180 ntBASIC16.71■□□□□ 0.27
NrlP54846 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NrlP54846 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms