Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ercc3P49135 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Ercc3P49135 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ercc3P49135 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ercc3P49135 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC18.67■□□□□ 0.58
Ercc3P49135 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ercc3P49135 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
Ercc3P49135 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Ercc3P49135 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ercc3P49135 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC18.67■□□□□ 0.58
Ercc3P49135 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.67■□□□□ 0.58
Ercc3P49135 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ercc3P49135 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ercc3P49135 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.66■□□□□ 0.58
Ercc3P49135 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.66■□□□□ 0.58
Ercc3P49135 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC18.66■□□□□ 0.58
Ercc3P49135 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC18.66■□□□□ 0.58
Ercc3P49135 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC18.66■□□□□ 0.58
Ercc3P49135 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.66■□□□□ 0.58
Ercc3P49135 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC18.66■□□□□ 0.58
Ercc3P49135 AC117588.1-201ENSMUST00000228510 999 ntBASIC18.66■□□□□ 0.58
Ercc3P49135 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Ercc3P49135 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ercc3P49135 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.66■□□□□ 0.58
Ercc3P49135 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Gm42901-201ENSMUST00000197735 3171 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Ercc3P49135 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Gm4609-201ENSMUST00000106443 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm5138-201ENSMUST00000113842 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm15191-201ENSMUST00000117933 1000 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm12182-201ENSMUST00000118655 1008 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm13882-201ENSMUST00000120886 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm10284-201ENSMUST00000145057 1005 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Gm10481-201ENSMUST00000179228 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm2574-201ENSMUST00000181051 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm3200-201ENSMUST00000181493 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm8825-201ENSMUST00000182565 998 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm4518-201ENSMUST00000182638 718 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm8330-201ENSMUST00000182754 1008 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm4575-201ENSMUST00000182991 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm8709-201ENSMUST00000183230 1012 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Gm10293-201ENSMUST00000076317 1002 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Gm6316-201ENSMUST00000082064 1020 ntBASIC18.65■□□□□ 0.58
Ercc3P49135 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC18.65■□□□□ 0.58
Ercc3P49135 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ercc3P49135 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ercc3P49135 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ercc3P49135 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.64■□□□□ 0.57
Ercc3P49135 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC18.64■□□□□ 0.57
Ercc3P49135 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 Gm13418-201ENSMUST00000119097 944 ntBASIC18.64■□□□□ 0.57
Ercc3P49135 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
Ercc3P49135 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC18.64■□□□□ 0.57
Ercc3P49135 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ercc3P49135 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms