Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.82□□□□□ -0.2
GdnfP48540 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
GdnfP48540 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC13.82□□□□□ -0.2
GdnfP48540 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
GdnfP48540 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.81□□□□□ -0.2
GdnfP48540 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
GdnfP48540 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Gm18032-201ENSMUST00000222541 538 ntBASIC13.81□□□□□ -0.2
GdnfP48540 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
GdnfP48540 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.81□□□□□ -0.2
GdnfP48540 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
GdnfP48540 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
GdnfP48540 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.8□□□□□ -0.2
GdnfP48540 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Gm26039-201ENSMUST00000158152 144 ntBASIC13.8□□□□□ -0.2
GdnfP48540 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Gm22697-201ENSMUST00000175194 63 ntBASIC13.8□□□□□ -0.2
GdnfP48540 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.8□□□□□ -0.2
GdnfP48540 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.8□□□□□ -0.2
GdnfP48540 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
GdnfP48540 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
GdnfP48540 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
GdnfP48540 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
GdnfP48540 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
GdnfP48540 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC13.79□□□□□ -0.2
GdnfP48540 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.79□□□□□ -0.2
GdnfP48540 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms