Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hist1h1dP43277 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Gm10584-201ENSMUST00000207036 2628 ntBASIC13.35□□□□□ -0.27
Hist1h1dP43277 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Gm37055-201ENSMUST00000191866 133 ntBASIC13.35□□□□□ -0.27
Hist1h1dP43277 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC13.35□□□□□ -0.27
Hist1h1dP43277 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hist1h1dP43277 BC037039-201ENSMUST00000192003 2205 ntBASIC13.35□□□□□ -0.27
Hist1h1dP43277 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gm13559-201ENSMUST00000120476 863 ntBASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hist1h1dP43277 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hist1h1dP43277 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hist1h1dP43277 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hist1h1dP43277 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hist1h1dP43277 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
Hist1h1dP43277 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm27011-201ENSMUST00000182352 972 ntBASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm37722-201ENSMUST00000193757 208 ntBASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.33□□□□□ -0.28
Hist1h1dP43277 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hist1h1dP43277 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms