Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.67■□□□□ 0.26
HttP42859 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
HttP42859 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HttP42859 Gm43703-201ENSMUST00000200523 763 ntBASIC16.66■□□□□ 0.26
HttP42859 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HttP42859 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC16.66■□□□□ 0.26
HttP42859 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Gm38225-201ENSMUST00000194001 393 ntBASIC16.66■□□□□ 0.26
HttP42859 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
HttP42859 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
HttP42859 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
HttP42859 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Gm9257-201ENSMUST00000221254 232 ntBASIC16.65■□□□□ 0.26
HttP42859 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
HttP42859 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HttP42859 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.65■□□□□ 0.26
HttP42859 Gm18049-201ENSMUST00000208909 581 ntBASIC16.65■□□□□ 0.26
HttP42859 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.65■□□□□ 0.26
HttP42859 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.65■□□□□ 0.26
HttP42859 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.65■□□□□ 0.26
HttP42859 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HttP42859 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.26
HttP42859 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
HttP42859 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC16.64■□□□□ 0.25
HttP42859 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.64■□□□□ 0.25
HttP42859 Gm44344-201ENSMUST00000200287 129 ntBASIC16.64■□□□□ 0.25
HttP42859 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HttP42859 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.64■□□□□ 0.25
HttP42859 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HttP42859 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.63■□□□□ 0.25
HttP42859 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
HttP42859 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.63■□□□□ 0.25
HttP42859 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Mir1247-201ENSMUST00000116706 82 ntBASIC16.63■□□□□ 0.25
HttP42859 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HttP42859 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
HttP42859 Gm42612-201ENSMUST00000197986 623 ntBASIC16.62■□□□□ 0.25
HttP42859 Gm43170-201ENSMUST00000199827 612 ntBASIC16.62■□□□□ 0.25
HttP42859 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Ldb3-207ENSMUST00000227819 1499 ntBASIC16.62■□□□□ 0.25
HttP42859 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HttP42859 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HttP42859 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.62■□□□□ 0.25
HttP42859 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.62■□□□□ 0.25
HttP42859 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.62■□□□□ 0.25
HttP42859 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC16.62■□□□□ 0.25
HttP42859 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC16.62■□□□□ 0.25
HttP42859 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms