Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox6P40645 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.82□□□□□ -0.04
Sox6P40645 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox6P40645 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox6P40645 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC14.82□□□□□ -0.04
Sox6P40645 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Sox6P40645 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox6P40645 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox6P40645 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Sox6P40645 Gm23634-201ENSMUST00000175071 91 ntBASIC14.82□□□□□ -0.04
Sox6P40645 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox6P40645 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Sox6P40645 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox6P40645 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox6P40645 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox6P40645 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.81□□□□□ -0.04
Sox6P40645 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Sox6P40645 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 AA414768-201ENSMUST00000121924 1257 ntBASIC14.81□□□□□ -0.04
Sox6P40645 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.81□□□□□ -0.04
Sox6P40645 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.81□□□□□ -0.04
Sox6P40645 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Sox6P40645 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.81□□□□□ -0.04
Sox6P40645 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Sox6P40645 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.81□□□□□ -0.04
Sox6P40645 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sox6P40645 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.8□□□□□ -0.04
Sox6P40645 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.8□□□□□ -0.04
Sox6P40645 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Gm44450-201ENSMUST00000199528 114 ntBASIC14.8□□□□□ -0.04
Sox6P40645 Gm5587-201ENSMUST00000206270 674 ntBASIC14.8□□□□□ -0.04
Sox6P40645 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sox6P40645 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sox6P40645 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sox6P40645 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms