Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Thbs1P35441 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Thbs1P35441 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.55□□□□□ -0.08
Thbs1P35441 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC14.55□□□□□ -0.08
Thbs1P35441 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
Thbs1P35441 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC14.55□□□□□ -0.08
Thbs1P35441 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.55□□□□□ -0.08
Thbs1P35441 AC127302.2-201ENSMUST00000215212 268 ntBASIC14.55□□□□□ -0.08
Thbs1P35441 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Thbs1P35441 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Thbs1P35441 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.54□□□□□ -0.08
Thbs1P35441 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Thbs1P35441 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Thbs1P35441 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Thbs1P35441 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Olfr129-201ENSMUST00000122318 993 ntBASIC14.54□□□□□ -0.08
Thbs1P35441 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Thbs1P35441 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Thbs1P35441 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Thbs1P35441 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Thbs1P35441 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Thbs1P35441 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.53□□□□□ -0.08
Thbs1P35441 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Gm17971-201ENSMUST00000190239 806 ntBASIC14.53□□□□□ -0.08
Thbs1P35441 Gm44454-201ENSMUST00000198541 138 ntBASIC14.53□□□□□ -0.08
Thbs1P35441 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Gm9172-201ENSMUST00000212092 954 ntBASIC14.53□□□□□ -0.08
Thbs1P35441 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.53□□□□□ -0.08
Thbs1P35441 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Thbs1P35441 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Thbs1P35441 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.52□□□□□ -0.08
Thbs1P35441 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC14.52□□□□□ -0.08
Thbs1P35441 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC14.52□□□□□ -0.08
Thbs1P35441 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Thbs1P35441 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Thbs1P35441 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Thbs1P35441 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC14.52□□□□□ -0.09
Thbs1P35441 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC14.52□□□□□ -0.09
Thbs1P35441 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.52□□□□□ -0.09
Thbs1P35441 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
Thbs1P35441 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.52□□□□□ -0.09
Thbs1P35441 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Thbs1P35441 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms