Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Ccl6P27784 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ccl6P27784 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccl6P27784 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Gm15794-201ENSMUST00000120182 631 ntBASIC12.3□□□□□ -0.44
Ccl6P27784 Olfr129-201ENSMUST00000122318 993 ntBASIC12.3□□□□□ -0.44
Ccl6P27784 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccl6P27784 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC12.3□□□□□ -0.44
Ccl6P27784 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
Ccl6P27784 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Ccl6P27784 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ccl6P27784 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.3□□□□□ -0.44
Ccl6P27784 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ccl6P27784 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Ccl6P27784 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccl6P27784 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.29□□□□□ -0.44
Ccl6P27784 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Gm7284-201ENSMUST00000131667 944 ntBASIC12.29□□□□□ -0.44
Ccl6P27784 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC12.29□□□□□ -0.44
Ccl6P27784 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccl6P27784 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
Ccl6P27784 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC12.29□□□□□ -0.44
Ccl6P27784 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl6P27784 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccl6P27784 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccl6P27784 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccl6P27784 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Ccl6P27784 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC12.28□□□□□ -0.44
Ccl6P27784 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Ccl6P27784 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 AC133083.1-201ENSMUST00000221736 2209 ntBASIC12.28□□□□□ -0.44
Ccl6P27784 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
Ccl6P27784 Gm27704-201ENSMUST00000185094 107 ntBASIC12.28□□□□□ -0.44
Ccl6P27784 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.28□□□□□ -0.44
Ccl6P27784 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccl6P27784 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms