Protein–RNA interactions for Protein: P24549

Aldh1a1, Retinal dehydrogenase 1, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aldh1a1P24549 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Aldh1a1P24549 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Gm18246-201ENSMUST00000221023 728 ntBASIC16.84■□□□□ 0.29
Aldh1a1P24549 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.84■□□□□ 0.29
Aldh1a1P24549 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.84■□□□□ 0.29
Aldh1a1P24549 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Aldh1a1P24549 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.83■□□□□ 0.29
Aldh1a1P24549 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC16.83■□□□□ 0.28
Aldh1a1P24549 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Aldh1a1P24549 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.83■□□□□ 0.28
Aldh1a1P24549 Gm19891-201ENSMUST00000189771 303 ntBASIC16.83■□□□□ 0.28
Aldh1a1P24549 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Gm7774-201ENSMUST00000200064 533 ntBASIC16.83■□□□□ 0.28
Aldh1a1P24549 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Aldh1a1P24549 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.82■□□□□ 0.28
Aldh1a1P24549 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Gm10253-201ENSMUST00000194270 940 ntBASIC16.82■□□□□ 0.28
Aldh1a1P24549 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Aldh1a1P24549 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Gm12008-201ENSMUST00000117791 755 ntBASIC16.81■□□□□ 0.28
Aldh1a1P24549 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Rpph1-201ENSMUST00000175096 319 ntBASIC16.81■□□□□ 0.28
Aldh1a1P24549 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.81■□□□□ 0.28
Aldh1a1P24549 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Aldh1a1P24549 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms