Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
P20040 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
P20040 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC14.02□□□□□ -0.17
P20040 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.02□□□□□ -0.17
P20040 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.02□□□□□ -0.17
P20040 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
P20040 Gm45328-201ENSMUST00000210942 917 ntBASIC14.02□□□□□ -0.17
P20040 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.02□□□□□ -0.17
P20040 AC154471.1-201ENSMUST00000224418 436 ntBASIC14.02□□□□□ -0.17
P20040 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
P20040 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
P20040 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
P20040 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.02□□□□□ -0.17
P20040 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
P20040 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
P20040 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
P20040 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
P20040 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
P20040 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.01□□□□□ -0.17
P20040 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.01□□□□□ -0.17
P20040 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Gm18421-201ENSMUST00000204122 625 ntBASIC14.01□□□□□ -0.17
P20040 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.01□□□□□ -0.17
P20040 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
P20040 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
P20040 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
P20040 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.01□□□□□ -0.17
P20040 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14□□□□□ -0.17
P20040 Zfp264-201ENSMUST00000208656 1563 ntBASIC14□□□□□ -0.17
P20040 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
P20040 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
P20040 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14□□□□□ -0.17
P20040 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
P20040 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14□□□□□ -0.17
P20040 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14□□□□□ -0.17
P20040 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14□□□□□ -0.17
P20040 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
P20040 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
P20040 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P20040 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
P20040 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
P20040 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
P20040 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
P20040 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
P20040 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
P20040 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
P20040 Sybu-209ENSMUST00000228639 4113 ntBASIC13.99□□□□□ -0.17
P20040 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P20040 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
P20040 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
P20040 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms