Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.06□□□□□ -0.32
Cxcl1P12850 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Cxcl1P12850 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC13.05□□□□□ -0.32
Cxcl1P12850 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.05□□□□□ -0.32
Cxcl1P12850 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Cxcl1P12850 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC13.05□□□□□ -0.32
Cxcl1P12850 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.04□□□□□ -0.32
Cxcl1P12850 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Gm6257-201ENSMUST00000163864 910 ntBASIC13.04□□□□□ -0.32
Cxcl1P12850 Gm29257-201ENSMUST00000186115 639 ntBASIC13.04□□□□□ -0.32
Cxcl1P12850 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cxcl1P12850 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Cxcl1P12850 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm29340-201ENSMUST00000188763 3854 ntBASIC13.03□□□□□ -0.32
Cxcl1P12850 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Mir5130-201ENSMUST00000175160 84 ntBASIC13.03□□□□□ -0.32
Cxcl1P12850 Mir6404-201ENSMUST00000183699 94 ntBASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC13.03□□□□□ -0.32
Cxcl1P12850 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.03□□□□□ -0.32
Cxcl1P12850 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cxcl1P12850 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms