Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccl3P10855 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ccl3P10855 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Ccl3P10855 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC13.87□□□□□ -0.19
Ccl3P10855 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ccl3P10855 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ccl3P10855 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ccl3P10855 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Haglr-201ENSMUST00000100000 2085 ntBASIC13.86□□□□□ -0.19
Ccl3P10855 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC13.86□□□□□ -0.19
Ccl3P10855 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.86□□□□□ -0.19
Ccl3P10855 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.86□□□□□ -0.19
Ccl3P10855 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ccl3P10855 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.86□□□□□ -0.19
Ccl3P10855 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ccl3P10855 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ccl3P10855 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.85□□□□□ -0.19
Ccl3P10855 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccl3P10855 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccl3P10855 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.85□□□□□ -0.19
Ccl3P10855 AA543401-201ENSMUST00000164248 1269 ntBASIC13.85□□□□□ -0.19
Ccl3P10855 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.85□□□□□ -0.19
Ccl3P10855 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.85□□□□□ -0.19
Ccl3P10855 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ccl3P10855 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccl3P10855 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccl3P10855 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.84□□□□□ -0.19
Ccl3P10855 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.84□□□□□ -0.19
Ccl3P10855 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ccl3P10855 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.84□□□□□ -0.19
Ccl3P10855 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Ccl3P10855 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.84□□□□□ -0.19
Ccl3P10855 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ccl3P10855 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ccl3P10855 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Ccl3P10855 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ccl3P10855 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms