Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Gm9727-201ENSMUST00000161387 555 ntBASIC16.67■□□□□ 0.26
TnfP06804 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.67■□□□□ 0.26
TnfP06804 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.67■□□□□ 0.26
TnfP06804 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.67■□□□□ 0.26
TnfP06804 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.67■□□□□ 0.26
TnfP06804 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TnfP06804 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TnfP06804 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TnfP06804 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TnfP06804 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.66■□□□□ 0.26
TnfP06804 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.66■□□□□ 0.26
TnfP06804 Gm11594-201ENSMUST00000122313 162 ntBASIC16.66■□□□□ 0.26
TnfP06804 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.66■□□□□ 0.26
TnfP06804 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.66■□□□□ 0.26
TnfP06804 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TnfP06804 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.66■□□□□ 0.26
TnfP06804 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TnfP06804 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Gm4899-201ENSMUST00000178708 719 ntBASIC16.65■□□□□ 0.26
TnfP06804 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.65■□□□□ 0.26
TnfP06804 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.65■□□□□ 0.26
TnfP06804 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TnfP06804 AC147366.1-201ENSMUST00000227671 852 ntBASIC16.65■□□□□ 0.26
TnfP06804 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TnfP06804 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TnfP06804 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
TnfP06804 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.65■□□□□ 0.26
TnfP06804 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TnfP06804 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TnfP06804 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms