Protein–RNA interactions for Protein: P04925

Prnp, Major prion protein, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrnpP04925 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PrnpP04925 Grk6-207ENSMUST00000225925 2769 ntBASIC16.26■□□□□ 0.19
PrnpP04925 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.26■□□□□ 0.19
PrnpP04925 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.26■□□□□ 0.19
PrnpP04925 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC16.26■□□□□ 0.19
PrnpP04925 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PrnpP04925 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
PrnpP04925 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PrnpP04925 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PrnpP04925 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.25■□□□□ 0.19
PrnpP04925 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
PrnpP04925 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PrnpP04925 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.25■□□□□ 0.19
PrnpP04925 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
PrnpP04925 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.25■□□□□ 0.19
PrnpP04925 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PrnpP04925 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
PrnpP04925 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.24■□□□□ 0.19
PrnpP04925 Gm14057-201ENSMUST00000120631 482 ntBASIC16.24■□□□□ 0.19
PrnpP04925 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PrnpP04925 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Mir6956-201ENSMUST00000183598 62 ntBASIC16.24■□□□□ 0.19
PrnpP04925 Gm5312-201ENSMUST00000203728 547 ntBASIC16.24■□□□□ 0.19
PrnpP04925 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.24■□□□□ 0.19
PrnpP04925 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.24■□□□□ 0.19
PrnpP04925 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
PrnpP04925 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
PrnpP04925 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Gm13616-201ENSMUST00000120600 222 ntBASIC16.23■□□□□ 0.19
PrnpP04925 Gm13365-201ENSMUST00000121188 973 ntBASIC16.23■□□□□ 0.19
PrnpP04925 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC16.23■□□□□ 0.19
PrnpP04925 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
PrnpP04925 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms