Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC11.53□□□□□ -0.56
TcraP01849 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC11.53□□□□□ -0.56
TcraP01849 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC11.53□□□□□ -0.56
TcraP01849 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC11.53□□□□□ -0.56
TcraP01849 Gm44878-201ENSMUST00000205812 1295 ntBASIC11.53□□□□□ -0.56
TcraP01849 Gm4974-201ENSMUST00000209974 875 ntBASIC11.53□□□□□ -0.56
TcraP01849 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.53□□□□□ -0.56
TcraP01849 AC135637.1-201ENSMUST00000227750 365 ntBASIC11.53□□□□□ -0.56
TcraP01849 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TcraP01849 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
TcraP01849 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TcraP01849 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
TcraP01849 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
TcraP01849 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
TcraP01849 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.52□□□□□ -0.56
TcraP01849 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC11.52□□□□□ -0.56
TcraP01849 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.52□□□□□ -0.56
TcraP01849 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
TcraP01849 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.52□□□□□ -0.57
TcraP01849 H2-K2-201ENSMUST00000174250 1049 ntBASIC11.52□□□□□ -0.57
TcraP01849 Gm37856-201ENSMUST00000191634 999 ntBASIC11.52□□□□□ -0.57
TcraP01849 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC11.52□□□□□ -0.57
TcraP01849 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC11.52□□□□□ -0.57
TcraP01849 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.57
TcraP01849 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
TcraP01849 Ap5m1-205ENSMUST00000227431 3757 ntBASIC11.52□□□□□ -0.57
TcraP01849 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
TcraP01849 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
TcraP01849 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.51□□□□□ -0.57
TcraP01849 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
TcraP01849 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.51□□□□□ -0.57
TcraP01849 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
TcraP01849 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC11.51□□□□□ -0.57
TcraP01849 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
TcraP01849 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
TcraP01849 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms