Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Gm27867-201ENSMUST00000184778 125 ntBASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Igh-VJ558P01758 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.61□□□□□ -0.23
Igh-VJ558P01758 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Igh-VJ558P01758 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Gm7977-201ENSMUST00000193787 748 ntBASIC13.6□□□□□ -0.23
Igh-VJ558P01758 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Igh-VJ558P01758 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Gm14859-201ENSMUST00000117752 357 ntBASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Gm12895-201ENSMUST00000122214 226 ntBASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Igh-VJ558P01758 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms