Protein–RNA interactions for Protein: P01734

T-cell receptor beta chain V region 3H.25, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01734 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
P01734 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
P01734 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
P01734 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.11■□□□□ 0.33
P01734 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.11■□□□□ 0.33
P01734 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
P01734 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC17.11■□□□□ 0.33
P01734 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
P01734 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.11■□□□□ 0.33
P01734 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.11■□□□□ 0.33
P01734 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
P01734 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
P01734 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
P01734 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
P01734 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
P01734 Gm8344-201ENSMUST00000119813 856 ntBASIC17.1■□□□□ 0.33
P01734 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC17.1■□□□□ 0.33
P01734 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.1■□□□□ 0.33
P01734 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Gm3928-201ENSMUST00000121141 1307 ntBASIC17.1■□□□□ 0.33
P01734 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
P01734 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01734 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.09■□□□□ 0.33
P01734 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
P01734 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.09■□□□□ 0.33
P01734 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC17.09■□□□□ 0.33
P01734 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC17.09■□□□□ 0.33
P01734 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.09■□□□□ 0.33
P01734 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
P01734 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
P01734 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
P01734 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01734 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
P01734 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01734 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.08■□□□□ 0.33
P01734 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
P01734 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC17.08■□□□□ 0.32
P01734 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
P01734 Gm6550-201ENSMUST00000187574 993 ntBASIC17.08■□□□□ 0.32
P01734 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.08■□□□□ 0.32
P01734 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
P01734 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms