Protein–RNA interactions for Protein: O88935

Syn1, Synapsin-1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syn1O88935 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.16■□□□□ 0.18
Syn1O88935 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Syn1O88935 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Gm10253-201ENSMUST00000194270 940 ntBASIC16.16■□□□□ 0.18
Syn1O88935 Gm20553-201ENSMUST00000204205 844 ntBASIC16.16■□□□□ 0.18
Syn1O88935 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Gpr146-202ENSMUST00000053120 1040 ntBASIC16.16■□□□□ 0.18
Syn1O88935 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syn1O88935 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Syn1O88935 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Syn1O88935 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Syn1O88935 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Syn1O88935 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Gm8344-201ENSMUST00000119813 856 ntBASIC16.15■□□□□ 0.18
Syn1O88935 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.15■□□□□ 0.18
Syn1O88935 Gm24158-201ENSMUST00000175263 71 ntBASIC16.15■□□□□ 0.18
Syn1O88935 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Mir6404-201ENSMUST00000183699 94 ntBASIC16.15■□□□□ 0.18
Syn1O88935 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC16.15■□□□□ 0.18
Syn1O88935 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Syn1O88935 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.15■□□□□ 0.18
Syn1O88935 Gm5366-201ENSMUST00000215494 1338 ntBASIC16.15■□□□□ 0.18
Syn1O88935 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syn1O88935 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.14■□□□□ 0.18
Syn1O88935 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Syn1O88935 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC16.14■□□□□ 0.17
Syn1O88935 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Syn1O88935 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Syn1O88935 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Syn1O88935 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Gm36967-201ENSMUST00000193814 266 ntBASIC16.14■□□□□ 0.17
Syn1O88935 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Syn1O88935 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Syn1O88935 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Syn1O88935 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syn1O88935 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.13■□□□□ 0.17
Syn1O88935 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Gm7653-201ENSMUST00000214567 508 ntBASIC16.13■□□□□ 0.17
Syn1O88935 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Syn1O88935 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Syn1O88935 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.12■□□□□ 0.17
Syn1O88935 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Syn1O88935 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Syn1O88935 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Syn1O88935 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Syn1O88935 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms