Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Hdac3O88895 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.11□□□□□ -0.15
Hdac3O88895 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.11□□□□□ -0.15
Hdac3O88895 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Gm44430-201ENSMUST00000203376 995 ntBASIC14.11□□□□□ -0.15
Hdac3O88895 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hdac3O88895 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.11□□□□□ -0.15
Hdac3O88895 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hdac3O88895 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.1□□□□□ -0.15
Hdac3O88895 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Hdac3O88895 Gm6623-201ENSMUST00000173570 544 ntBASIC14.1□□□□□ -0.15
Hdac3O88895 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.1□□□□□ -0.15
Hdac3O88895 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.1□□□□□ -0.15
Hdac3O88895 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hdac3O88895 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Hdac3O88895 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC14.1□□□□□ -0.15
Hdac3O88895 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Hdac3O88895 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Hdac3O88895 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.1□□□□□ -0.15
Hdac3O88895 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.09□□□□□ -0.15
Hdac3O88895 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hdac3O88895 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Hdac3O88895 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.09□□□□□ -0.15
Hdac3O88895 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.09□□□□□ -0.15
Hdac3O88895 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Gm15442-201ENSMUST00000117905 1527 ntBASIC14.09□□□□□ -0.15
Hdac3O88895 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Hdac3O88895 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.09□□□□□ -0.15
Hdac3O88895 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Hdac3O88895 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Hdac3O88895 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hdac3O88895 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Hdac3O88895 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hdac3O88895 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Hdac3O88895 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Hdac3O88895 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms