Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC15.11■□□□□ 0.01
Hcn1O88704 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Hcn1O88704 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hcn1O88704 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.11■□□□□ 0.01
Hcn1O88704 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hcn1O88704 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.11■□□□□ 0.01
Hcn1O88704 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
Hcn1O88704 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Mir3081-201ENSMUST00000175305 84 ntBASIC15.1■□□□□ 0.01
Hcn1O88704 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hcn1O88704 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Hcn1O88704 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
Hcn1O88704 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hcn1O88704 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Gm10052-201ENSMUST00000168019 960 ntBASIC15.09■□□□□ 0.01
Hcn1O88704 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.09■□□□□ 0.01
Hcn1O88704 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Gm7729-201ENSMUST00000050143 801 ntBASIC15.09■□□□□ 0.01
Hcn1O88704 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Hcn1O88704 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Hcn1O88704 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hcn1O88704 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hcn1O88704 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Hcn1O88704 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Hcn1O88704 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.08■□□□□ 0
Hcn1O88704 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.08■□□□□ 0
Hcn1O88704 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Hcn1O88704 Gm18669-201ENSMUST00000216049 778 ntBASIC15.08■□□□□ 0
Hcn1O88704 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Hcn1O88704 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC15.08■□□□□ 0
Hcn1O88704 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.08■□□□□ 0
Hcn1O88704 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.08■□□□□ 0
Hcn1O88704 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.08■□□□□ 0
Hcn1O88704 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Hcn1O88704 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC15.08■□□□□ 0
Hcn1O88704 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Hcn1O88704 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Hcn1O88704 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Hcn1O88704 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms