Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC14.25□□□□□ -0.13
Lmx1bO88609 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.25□□□□□ -0.13
Lmx1bO88609 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm9172-201ENSMUST00000212092 954 ntBASIC14.25□□□□□ -0.13
Lmx1bO88609 Gm8655-201ENSMUST00000221159 852 ntBASIC14.25□□□□□ -0.13
Lmx1bO88609 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lmx1bO88609 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lmx1bO88609 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm1401-201ENSMUST00000122048 772 ntBASIC14.24□□□□□ -0.13
Lmx1bO88609 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.24□□□□□ -0.13
Lmx1bO88609 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gm19430-201ENSMUST00000193847 2137 ntBASIC14.24□□□□□ -0.13
Lmx1bO88609 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lmx1bO88609 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lmx1bO88609 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lmx1bO88609 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm11780-201ENSMUST00000136880 516 ntBASIC14.23□□□□□ -0.13
Lmx1bO88609 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm7230-201ENSMUST00000173026 815 ntBASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Mir6404-201ENSMUST00000183699 94 ntBASIC14.23□□□□□ -0.13
Lmx1bO88609 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.23□□□□□ -0.13
Lmx1bO88609 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Lmx1bO88609 AC133083.1-201ENSMUST00000221736 2209 ntBASIC14.23□□□□□ -0.13
Lmx1bO88609 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lmx1bO88609 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Lmx1bO88609 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.23□□□□□ -0.13
Lmx1bO88609 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmx1bO88609 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmx1bO88609 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Lmx1bO88609 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lmx1bO88609 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC14.22□□□□□ -0.13
Lmx1bO88609 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms