Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC19.17■□□□□ 0.66
Cops6O88545 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC19.17■□□□□ 0.66
Cops6O88545 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC19.17■□□□□ 0.66
Cops6O88545 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Cops6O88545 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cops6O88545 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cops6O88545 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.16■□□□□ 0.66
Cops6O88545 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.16■□□□□ 0.66
Cops6O88545 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC19.16■□□□□ 0.66
Cops6O88545 Gm7286-201ENSMUST00000182691 1007 ntBASIC19.16■□□□□ 0.66
Cops6O88545 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cops6O88545 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cops6O88545 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Mir7036b-201ENSMUST00000184791 63 ntBASIC19.15■□□□□ 0.66
Cops6O88545 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 AC119177.1-201ENSMUST00000227647 1332 ntBASIC19.15■□□□□ 0.66
Cops6O88545 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Cops6O88545 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cops6O88545 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops6O88545 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cops6O88545 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cops6O88545 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Cops6O88545 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Gm45747-201ENSMUST00000212203 999 ntBASIC19.14■□□□□ 0.65
Cops6O88545 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC19.14■□□□□ 0.65
Cops6O88545 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC19.14■□□□□ 0.65
Cops6O88545 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Cops6O88545 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cops6O88545 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Cops6O88545 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC19.13■□□□□ 0.65
Cops6O88545 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Cops6O88545 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC19.13■□□□□ 0.65
Cops6O88545 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC19.13■□□□□ 0.65
Cops6O88545 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC19.13■□□□□ 0.65
Cops6O88545 Gm5177-201ENSMUST00000183092 997 ntBASIC19.13■□□□□ 0.65
Cops6O88545 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC19.13■□□□□ 0.65
Cops6O88545 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cops6O88545 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cops6O88545 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms