Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Tnfrsf17O88472 Gm25287-201ENSMUST00000103846 110 ntBASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Gm22918-201ENSMUST00000103855 110 ntBASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Gm27618-201ENSMUST00000183671 60 ntBASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.6□□□□□ -0.07
Tnfrsf17O88472 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.6□□□□□ -0.07
Tnfrsf17O88472 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Tnfrsf17O88472 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Tnfrsf17O88472 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Gm9385-201ENSMUST00000117563 472 ntBASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Mir7684-201ENSMUST00000183858 60 ntBASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.58□□□□□ -0.08
Tnfrsf17O88472 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Tnfrsf17O88472 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Tnfrsf17O88472 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms