Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.25■□□□□ 0.03
Cacna1hO88427 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm19164-201ENSMUST00000210667 640 ntBASIC15.25■□□□□ 0.03
Cacna1hO88427 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC15.25■□□□□ 0.03
Cacna1hO88427 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.25■□□□□ 0.03
Cacna1hO88427 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1hO88427 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Gm45668-201ENSMUST00000211271 493 ntBASIC15.24■□□□□ 0.03
Cacna1hO88427 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.24■□□□□ 0.03
Cacna1hO88427 Gm27533-201ENSMUST00000183800 152 ntBASIC15.24■□□□□ 0.03
Cacna1hO88427 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1hO88427 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Cacna1hO88427 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1hO88427 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm42612-201ENSMUST00000197986 623 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm43170-201ENSMUST00000199827 612 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.22■□□□□ 0.03
Cacna1hO88427 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Cacna1hO88427 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Cacna1hO88427 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Cacna1hO88427 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms