Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col5a1O88207 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Col5a1O88207 Gm12151-201ENSMUST00000121374 290 ntBASIC14.1□□□□□ -0.15
Col5a1O88207 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.1□□□□□ -0.15
Col5a1O88207 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Gm7774-201ENSMUST00000200064 533 ntBASIC14.1□□□□□ -0.15
Col5a1O88207 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.1□□□□□ -0.15
Col5a1O88207 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Thap2-203ENSMUST00000218989 527 ntBASIC14.1□□□□□ -0.15
Col5a1O88207 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col5a1O88207 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC14.1□□□□□ -0.15
Col5a1O88207 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.1□□□□□ -0.15
Col5a1O88207 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col5a1O88207 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Col5a1O88207 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col5a1O88207 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.09□□□□□ -0.15
Col5a1O88207 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col5a1O88207 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC14.09□□□□□ -0.15
Col5a1O88207 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.09□□□□□ -0.15
Col5a1O88207 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.09□□□□□ -0.15
Col5a1O88207 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.09□□□□□ -0.15
Col5a1O88207 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col5a1O88207 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col5a1O88207 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Col5a1O88207 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col5a1O88207 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Col5a1O88207 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22065-201ENSMUST00000103753 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22066-201ENSMUST00000103761 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24932-201ENSMUST00000103763 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24115-201ENSMUST00000103799 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22190-201ENSMUST00000103827 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22191-201ENSMUST00000103831 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24721-201ENSMUST00000103849 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm28018-201ENSMUST00000103869 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm26399-201ENSMUST00000103937 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm13223-201ENSMUST00000118609 747 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25349-201ENSMUST00000177728 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm23616-201ENSMUST00000177797 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25871-201ENSMUST00000177816 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24752-201ENSMUST00000178240 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24496-201ENSMUST00000178287 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25649-201ENSMUST00000178476 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25548-201ENSMUST00000178681 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm23147-201ENSMUST00000178841 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm26095-201ENSMUST00000179270 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22171-201ENSMUST00000179283 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm23936-201ENSMUST00000179354 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm22619-201ENSMUST00000179516 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25255-201ENSMUST00000179579 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24755-201ENSMUST00000179691 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm26506-201ENSMUST00000179692 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm25086-201ENSMUST00000179931 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm23243-201ENSMUST00000180047 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24659-201ENSMUST00000180212 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm24169-201ENSMUST00000180244 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm23689-201ENSMUST00000180354 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm27359-201ENSMUST00000184153 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm27785-201ENSMUST00000184268 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm27466-201ENSMUST00000184396 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm27703-201ENSMUST00000184836 110 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.08□□□□□ -0.15
Col5a1O88207 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.08□□□□□ -0.15
Col5a1O88207 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
Col5a1O88207 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col5a1O88207 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
Col5a1O88207 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms