Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.41■□□□□ 0.22
Ttc3O88196 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.41■□□□□ 0.22
Ttc3O88196 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.41■□□□□ 0.22
Ttc3O88196 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC16.41■□□□□ 0.22
Ttc3O88196 Gm44335-201ENSMUST00000196879 141 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 Gm44297-201ENSMUST00000198304 141 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 Gm44346-201ENSMUST00000198851 141 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.41■□□□□ 0.22
Ttc3O88196 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.41■□□□□ 0.22
Ttc3O88196 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Ttc3O88196 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
Ttc3O88196 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Ttc3O88196 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Gm15427-201ENSMUST00000117288 531 ntBASIC16.4■□□□□ 0.22
Ttc3O88196 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC16.4■□□□□ 0.22
Ttc3O88196 Gm27494-201ENSMUST00000184735 189 ntBASIC16.4■□□□□ 0.22
Ttc3O88196 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Ttc3O88196 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.4■□□□□ 0.22
Ttc3O88196 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Ttc3O88196 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Ttc3O88196 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ttc3O88196 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC16.39■□□□□ 0.21
Ttc3O88196 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC16.39■□□□□ 0.21
Ttc3O88196 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Ttc3O88196 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.39■□□□□ 0.21
Ttc3O88196 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Ttc3O88196 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Ttc3O88196 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ttc3O88196 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC16.38■□□□□ 0.21
Ttc3O88196 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.38■□□□□ 0.21
Ttc3O88196 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.38■□□□□ 0.21
Ttc3O88196 Gm43125-201ENSMUST00000201724 730 ntBASIC16.38■□□□□ 0.21
Ttc3O88196 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.38■□□□□ 0.21
Ttc3O88196 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.38■□□□□ 0.21
Ttc3O88196 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC16.38■□□□□ 0.21
Ttc3O88196 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ttc3O88196 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.38■□□□□ 0.21
Ttc3O88196 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ttc3O88196 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms