Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Mir8098-201ENSMUST00000184011 137 ntBASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm28659-201ENSMUST00000188013 759 ntBASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm6376-201ENSMUST00000209407 580 ntBASIC15.53■□□□□ 0.08
Pdlim1O70400 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.53■□□□□ 0.08
Pdlim1O70400 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.53■□□□□ 0.08
Pdlim1O70400 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pdlim1O70400 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.53■□□□□ 0.08
Pdlim1O70400 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC15.52■□□□□ 0.08
Pdlim1O70400 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.52■□□□□ 0.08
Pdlim1O70400 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.52■□□□□ 0.08
Pdlim1O70400 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.52■□□□□ 0.08
Pdlim1O70400 Gm11780-201ENSMUST00000136880 516 ntBASIC15.52■□□□□ 0.08
Pdlim1O70400 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC15.52■□□□□ 0.08
Pdlim1O70400 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pdlim1O70400 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pdlim1O70400 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
Pdlim1O70400 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC15.52■□□□□ 0.07
Pdlim1O70400 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pdlim1O70400 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Pdlim1O70400 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pdlim1O70400 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Gm18856-201ENSMUST00000178096 1374 ntBASIC15.51■□□□□ 0.07
Pdlim1O70400 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Pdlim1O70400 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pdlim1O70400 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.5■□□□□ 0.07
Pdlim1O70400 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Pdlim1O70400 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdlim1O70400 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC15.5■□□□□ 0.07
Pdlim1O70400 Gm13418-201ENSMUST00000119097 944 ntBASIC15.5■□□□□ 0.07
Pdlim1O70400 Gm15358-201ENSMUST00000119249 520 ntBASIC15.5■□□□□ 0.07
Pdlim1O70400 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Pdlim1O70400 Gm27741-201ENSMUST00000185060 237 ntBASIC15.5■□□□□ 0.07
Pdlim1O70400 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdlim1O70400 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC15.5■□□□□ 0.07
Pdlim1O70400 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Pdlim1O70400 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms