Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.3□□□□□ -0.12
Pdlim3O70209 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Mir1668-201ENSMUST00000184114 107 ntBASIC14.3□□□□□ -0.12
Pdlim3O70209 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pdlim3O70209 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Pdlim3O70209 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim3O70209 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
Pdlim3O70209 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.29□□□□□ -0.12
Pdlim3O70209 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Pdlim3O70209 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.29□□□□□ -0.12
Pdlim3O70209 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim3O70209 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.29□□□□□ -0.12
Pdlim3O70209 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Pdlim3O70209 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pdlim3O70209 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Pdlim3O70209 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.28□□□□□ -0.12
Pdlim3O70209 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.28□□□□□ -0.12
Pdlim3O70209 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.28□□□□□ -0.12
Pdlim3O70209 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC14.28□□□□□ -0.12
Pdlim3O70209 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Gm10812-201ENSMUST00000099864 546 ntBASIC14.28□□□□□ -0.12
Pdlim3O70209 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pdlim3O70209 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.27□□□□□ -0.12
Pdlim3O70209 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Pdlim3O70209 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.27□□□□□ -0.12
Pdlim3O70209 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdlim3O70209 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Pdlim3O70209 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdlim3O70209 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdlim3O70209 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdlim3O70209 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms