Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC17.27■□□□□ 0.36
Trdmt1O55055 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Trdmt1O55055 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Gm11453-201ENSMUST00000117318 1007 ntBASIC17.27■□□□□ 0.36
Trdmt1O55055 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Trdmt1O55055 Gm20553-201ENSMUST00000204205 844 ntBASIC17.27■□□□□ 0.36
Trdmt1O55055 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
Trdmt1O55055 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trdmt1O55055 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trdmt1O55055 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Trdmt1O55055 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trdmt1O55055 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Trdmt1O55055 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trdmt1O55055 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trdmt1O55055 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC17.26■□□□□ 0.35
Trdmt1O55055 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Gm11745-201ENSMUST00000121669 448 ntBASIC17.26■□□□□ 0.35
Trdmt1O55055 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.26■□□□□ 0.35
Trdmt1O55055 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Trdmt1O55055 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trdmt1O55055 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.25■□□□□ 0.35
Trdmt1O55055 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.25■□□□□ 0.35
Trdmt1O55055 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.25■□□□□ 0.35
Trdmt1O55055 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trdmt1O55055 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trdmt1O55055 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trdmt1O55055 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trdmt1O55055 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 Gm14057-201ENSMUST00000120631 482 ntBASIC17.24■□□□□ 0.35
Trdmt1O55055 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trdmt1O55055 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Trdmt1O55055 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trdmt1O55055 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trdmt1O55055 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Gm12008-201ENSMUST00000117791 755 ntBASIC17.23■□□□□ 0.35
Trdmt1O55055 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Gm8318-201ENSMUST00000182954 872 ntBASIC17.23■□□□□ 0.35
Trdmt1O55055 Mir6990-201ENSMUST00000183724 91 ntBASIC17.23■□□□□ 0.35
Trdmt1O55055 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trdmt1O55055 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC17.23■□□□□ 0.35
Trdmt1O55055 Gm5628-201ENSMUST00000222318 1049 ntBASIC17.23■□□□□ 0.35
Trdmt1O55055 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms