Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SncaO55042 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Gm13559-201ENSMUST00000120476 863 ntBASIC13.06□□□□□ -0.32
SncaO55042 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Gm9484-201ENSMUST00000195892 1159 ntBASIC13.06□□□□□ -0.32
SncaO55042 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.06□□□□□ -0.32
SncaO55042 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.06□□□□□ -0.32
SncaO55042 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SncaO55042 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.06□□□□□ -0.32
SncaO55042 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
SncaO55042 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
SncaO55042 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SncaO55042 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.05□□□□□ -0.32
SncaO55042 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SncaO55042 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.05□□□□□ -0.32
SncaO55042 Gm45058-201ENSMUST00000205810 766 ntBASIC13.05□□□□□ -0.32
SncaO55042 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.05□□□□□ -0.32
SncaO55042 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
SncaO55042 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC13.05□□□□□ -0.32
SncaO55042 Gm44616-201ENSMUST00000206417 1732 ntBASIC13.05□□□□□ -0.32
SncaO55042 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SncaO55042 Gm44729-201ENSMUST00000206759 2052 ntBASIC13.04□□□□□ -0.32
SncaO55042 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
SncaO55042 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.04□□□□□ -0.32
SncaO55042 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SncaO55042 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
SncaO55042 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
SncaO55042 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
SncaO55042 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SncaO55042 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SncaO55042 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SncaO55042 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SncaO55042 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SncaO55042 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms