Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm25287-201ENSMUST00000103846 110 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm22918-201ENSMUST00000103855 110 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm12428-201ENSMUST00000119844 727 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cacna1bO55017 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.15■□□□□ 0.02
Cacna1bO55017 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
Cacna1bO55017 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.14■□□□□ 0.01
Cacna1bO55017 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm43125-201ENSMUST00000201724 730 ntBASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC15.14■□□□□ 0.01
Cacna1bO55017 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm5866-201ENSMUST00000177881 973 ntBASIC15.14■□□□□ 0.01
Cacna1bO55017 Gm18246-201ENSMUST00000221023 728 ntBASIC15.14■□□□□ 0.01
Cacna1bO55017 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cacna1bO55017 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1bO55017 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
Cacna1bO55017 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1bO55017 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1bO55017 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Cacna1bO55017 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Gm18889-201ENSMUST00000174284 929 ntBASIC15.13■□□□□ 0.01
Cacna1bO55017 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.13■□□□□ 0.01
Cacna1bO55017 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.13■□□□□ 0.01
Cacna1bO55017 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Cacna1bO55017 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms