Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 BC037039-201ENSMUST00000192003 2205 ntBASIC16.93■□□□□ 0.3
Nr1i3O35627 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Nr1i3O35627 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Nr1i3O35627 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nr1i3O35627 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC16.92■□□□□ 0.3
Nr1i3O35627 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Nr1i3O35627 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Gm7367-201ENSMUST00000057611 492 ntBASIC16.92■□□□□ 0.3
Nr1i3O35627 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.92■□□□□ 0.3
Nr1i3O35627 Gm8784-201ENSMUST00000222096 1435 ntBASIC16.92■□□□□ 0.3
Nr1i3O35627 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Nr1i3O35627 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.91■□□□□ 0.3
Nr1i3O35627 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.91■□□□□ 0.3
Nr1i3O35627 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Nr1i3O35627 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.9■□□□□ 0.3
Nr1i3O35627 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Rprl3-201ENSMUST00000157400 290 ntBASIC16.9■□□□□ 0.3
Nr1i3O35627 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Nr1i3O35627 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Nr1i3O35627 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Nr1i3O35627 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Nr1i3O35627 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Nr1i3O35627 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms