Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Gm12742-201ENSMUST00000117326 410 ntBASIC14.7□□□□□ -0.06
Abca4O35600 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.7□□□□□ -0.06
Abca4O35600 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.7□□□□□ -0.06
Abca4O35600 Gm43703-201ENSMUST00000200523 763 ntBASIC14.7□□□□□ -0.06
Abca4O35600 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Abca4O35600 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Abca4O35600 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC14.69□□□□□ -0.06
Abca4O35600 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.69□□□□□ -0.06
Abca4O35600 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC14.69□□□□□ -0.06
Abca4O35600 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.69□□□□□ -0.06
Abca4O35600 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.69□□□□□ -0.06
Abca4O35600 Gm44344-201ENSMUST00000200287 129 ntBASIC14.69□□□□□ -0.06
Abca4O35600 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.69□□□□□ -0.06
Abca4O35600 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Abca4O35600 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Abca4O35600 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Abca4O35600 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.69□□□□□ -0.06
Abca4O35600 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC14.69□□□□□ -0.06
Abca4O35600 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Gm3786-201ENSMUST00000202659 378 ntBASIC14.69□□□□□ -0.06
Abca4O35600 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.69□□□□□ -0.06
Abca4O35600 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Abca4O35600 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.68□□□□□ -0.06
Abca4O35600 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Abca4O35600 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.68□□□□□ -0.06
Abca4O35600 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.68□□□□□ -0.06
Abca4O35600 Gm37424-201ENSMUST00000191727 561 ntBASIC14.68□□□□□ -0.06
Abca4O35600 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Abca4O35600 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Abca4O35600 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Abca4O35600 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.67□□□□□ -0.06
Abca4O35600 Gm19164-201ENSMUST00000210667 640 ntBASIC14.67□□□□□ -0.06
Abca4O35600 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.67□□□□□ -0.06
Abca4O35600 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.67□□□□□ -0.06
Abca4O35600 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Abca4O35600 Gm15198-201ENSMUST00000117283 177 ntBASIC14.67□□□□□ -0.06
Abca4O35600 Gm12957-201ENSMUST00000117835 377 ntBASIC14.67□□□□□ -0.06
Abca4O35600 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.67□□□□□ -0.06
Abca4O35600 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.67□□□□□ -0.06
Abca4O35600 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Abca4O35600 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC14.66□□□□□ -0.06
Abca4O35600 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC14.66□□□□□ -0.06
Abca4O35600 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Abca4O35600 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Abca4O35600 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Abca4O35600 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms