Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc1a6O35544 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.54■□□□□ 0.08
Slc1a6O35544 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Slc1a6O35544 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Slc1a6O35544 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Gm6257-201ENSMUST00000163864 910 ntBASIC15.53■□□□□ 0.08
Slc1a6O35544 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Gm30025-201ENSMUST00000218555 728 ntBASIC15.53■□□□□ 0.08
Slc1a6O35544 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.53■□□□□ 0.08
Slc1a6O35544 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Slc1a6O35544 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc1a6O35544 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc1a6O35544 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Slc1a6O35544 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Slc1a6O35544 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
Slc1a6O35544 Mir6404-201ENSMUST00000183699 94 ntBASIC15.52■□□□□ 0.08
Slc1a6O35544 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.52■□□□□ 0.07
Slc1a6O35544 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Slc1a6O35544 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC15.52■□□□□ 0.07
Slc1a6O35544 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.51■□□□□ 0.07
Slc1a6O35544 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.51■□□□□ 0.07
Slc1a6O35544 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Gm10052-201ENSMUST00000168019 960 ntBASIC15.51■□□□□ 0.07
Slc1a6O35544 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Gm7729-201ENSMUST00000050143 801 ntBASIC15.51■□□□□ 0.07
Slc1a6O35544 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.51■□□□□ 0.07
Slc1a6O35544 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Slc1a6O35544 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Slc1a6O35544 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
Slc1a6O35544 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Slc1a6O35544 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Slc1a6O35544 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.5■□□□□ 0.07
Slc1a6O35544 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Slc1a6O35544 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.5■□□□□ 0.07
Slc1a6O35544 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms