Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Efnb3O35393 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Efnb3O35393 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC12.48□□□□□ -0.41
Efnb3O35393 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Efnb3O35393 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm30025-201ENSMUST00000218555 728 ntBASIC12.48□□□□□ -0.41
Efnb3O35393 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Efnb3O35393 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Efnb3O35393 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Efnb3O35393 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC12.48□□□□□ -0.41
Efnb3O35393 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.47□□□□□ -0.41
Efnb3O35393 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Efnb3O35393 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.47□□□□□ -0.41
Efnb3O35393 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 Gm29707-201ENSMUST00000196325 491 ntBASIC12.47□□□□□ -0.41
Efnb3O35393 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.47□□□□□ -0.41
Efnb3O35393 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Efnb3O35393 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Efnb3O35393 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Efnb3O35393 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Efnb3O35393 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC12.46□□□□□ -0.41
Efnb3O35393 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Efnb3O35393 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Efnb3O35393 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Efnb3O35393 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC12.46□□□□□ -0.41
Efnb3O35393 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Efnb3O35393 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Efnb3O35393 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.42
Efnb3O35393 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Efnb3O35393 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Efnb3O35393 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Efnb3O35393 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms