Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tnfrsf11aO35305 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Gm7153-201ENSMUST00000117092 455 ntBASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 AC127302.2-201ENSMUST00000215212 268 ntBASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tnfrsf11aO35305 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Gm11780-201ENSMUST00000136880 516 ntBASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tnfrsf11aO35305 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tnfrsf11aO35305 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tnfrsf11aO35305 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms