Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.8□□□□□ -0.04
Cx3cl1O35188 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cx3cl1O35188 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.79□□□□□ -0.04
Cx3cl1O35188 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cx3cl1O35188 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Gm7506-201ENSMUST00000207758 815 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 AC160338.1-201ENSMUST00000214232 705 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 AC069562.2-201ENSMUST00000224644 2146 ntBASIC14.78□□□□□ -0.04
Cx3cl1O35188 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cx3cl1O35188 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cx3cl1O35188 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Gm27741-201ENSMUST00000185060 237 ntBASIC14.77□□□□□ -0.05
Cx3cl1O35188 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Rbfox2-206ENSMUST00000227314 1810 ntBASIC14.77□□□□□ -0.05
Cx3cl1O35188 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cx3cl1O35188 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms