Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.61□□□□□ -0.23
Gfra3O35118 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gfra3O35118 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.6□□□□□ -0.23
Gfra3O35118 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.6□□□□□ -0.23
Gfra3O35118 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.6□□□□□ -0.23
Gfra3O35118 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.6□□□□□ -0.23
Gfra3O35118 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC13.6□□□□□ -0.23
Gfra3O35118 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gfra3O35118 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gfra3O35118 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Gfra3O35118 Gm7230-201ENSMUST00000173026 815 ntBASIC13.59□□□□□ -0.23
Gfra3O35118 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.59□□□□□ -0.23
Gfra3O35118 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Gm6089-201ENSMUST00000197666 938 ntBASIC13.59□□□□□ -0.23
Gfra3O35118 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.59□□□□□ -0.23
Gfra3O35118 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Gfra3O35118 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Gfra3O35118 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gfra3O35118 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gfra3O35118 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gfra3O35118 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gfra3O35118 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.58□□□□□ -0.23
Gfra3O35118 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.23
Gfra3O35118 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gfra3O35118 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Gfra3O35118 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC13.58□□□□□ -0.24
Gfra3O35118 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.58□□□□□ -0.24
Gfra3O35118 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC13.58□□□□□ -0.24
Gfra3O35118 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Gfra3O35118 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gfra3O35118 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms