Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm2574-201ENSMUST00000181051 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm3200-201ENSMUST00000181493 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm8825-201ENSMUST00000182565 998 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm4518-201ENSMUST00000182638 718 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm8330-201ENSMUST00000182754 1008 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm4575-201ENSMUST00000182991 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm8709-201ENSMUST00000183230 1012 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm10293-201ENSMUST00000076317 1002 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Gm6316-201ENSMUST00000082064 1020 ntBASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav13d-3J3QMG8 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Gm18669-201ENSMUST00000216049 778 ntBASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.84□□□□□ -0.19
Trav13d-3J3QMG8 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13d-3J3QMG8 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13d-3J3QMG8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.83□□□□□ -0.19
Trav13d-3J3QMG8 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav13d-3J3QMG8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm7935-201ENSMUST00000100555 1278 ntBASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm7506-201ENSMUST00000207758 815 ntBASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav13d-3J3QMG8 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trav13d-3J3QMG8 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms