Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Gm3139J3QK78 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.67■□□□□ 0.1
Gm3139J3QK78 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Gm3139J3QK78 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC15.66■□□□□ 0.1
Gm3139J3QK78 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gm2308-201ENSMUST00000166539 1004 ntBASIC15.66■□□□□ 0.1
Gm3139J3QK78 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gm15590-201ENSMUST00000078419 552 ntBASIC15.66■□□□□ 0.1
Gm3139J3QK78 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Gm3139J3QK78 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.65■□□□□ 0.1
Gm3139J3QK78 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Gm3139J3QK78 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm11764-201ENSMUST00000120221 623 ntBASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm6184-201ENSMUST00000120403 1261 ntBASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Gm20628-201ENSMUST00000177363 3215 ntBASIC15.64■□□□□ 0.09
Gm3139J3QK78 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Gm3139J3QK78 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms