Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
NpcdF8VQB8 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Gm13294-201ENSMUST00000121757 1330 ntBASIC18.88■□□□□ 0.61
NpcdF8VQB8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
NpcdF8VQB8 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC18.87■□□□□ 0.61
NpcdF8VQB8 H2-Pa-201ENSMUST00000182803 626 ntBASIC18.87■□□□□ 0.61
NpcdF8VQB8 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
NpcdF8VQB8 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NpcdF8VQB8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22065-201ENSMUST00000103753 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22066-201ENSMUST00000103761 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24932-201ENSMUST00000103763 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24115-201ENSMUST00000103799 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22190-201ENSMUST00000103827 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22191-201ENSMUST00000103831 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24721-201ENSMUST00000103849 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm28018-201ENSMUST00000103869 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm26399-201ENSMUST00000103937 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm13823-201ENSMUST00000119930 345 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25349-201ENSMUST00000177728 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm23616-201ENSMUST00000177797 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25871-201ENSMUST00000177816 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24752-201ENSMUST00000178240 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24496-201ENSMUST00000178287 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25649-201ENSMUST00000178476 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25548-201ENSMUST00000178681 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm23147-201ENSMUST00000178841 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm26095-201ENSMUST00000179270 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22171-201ENSMUST00000179283 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm23936-201ENSMUST00000179354 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm22619-201ENSMUST00000179516 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25255-201ENSMUST00000179579 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm24755-201ENSMUST00000179691 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm26506-201ENSMUST00000179692 110 ntBASIC18.85■□□□□ 0.61
NpcdF8VQB8 Gm25086-201ENSMUST00000179931 110 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms