Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc85cE9Q6B2 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ccdc85cE9Q6B2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ccdc85cE9Q6B2 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Gm38225-201ENSMUST00000194001 393 ntBASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ccdc85cE9Q6B2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 AC025913.2-201ENSMUST00000220136 1766 ntBASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm2810-201ENSMUST00000118681 990 ntBASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm25144-201ENSMUST00000179561 110 ntBASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm25352-201ENSMUST00000179815 110 ntBASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ccdc85cE9Q6B2 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Gm14767-201ENSMUST00000121559 586 ntBASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Ccdc85cE9Q6B2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Gm8515-201ENSMUST00000194852 576 ntBASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Ccdc85cE9Q6B2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Wnt10b-206ENSMUST00000228546 2709 ntBASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Gm15824-201ENSMUST00000119516 955 ntBASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ccdc85cE9Q6B2 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms